OmniBLAST will perform a recursive BLAST search on a set of protein
databases (BLASTP or BLASTX, depending on the query sequence) or
nucleotide databases (BLASTN and
TBLASTX or TBLASTN) available at the Sanger Institute and return a list
of the best five HSP for each database. If there are any HSP you can
click on Full Search to see the complete BLAST output.
| T. brucei GeneDB predicted genes (coding sequences) | DNA sequence of all predicted coding sequences in the T. brucei strain 927 genome as well as those predicted in the 3 strain 427, variant 221a expression site BACs. |
| T. brucei GeneDB predicted proteins | Predicted protein sequence of all coding sequences in the T. brucei strain 927 genome as well as those predicted in the 3 strain 427, variant 221a expression site BACs.
|
| T. brucei contigs (DNA) | The sequences of all contigs accessible through GeneDB. |
| chromosome IX reads | |
| chromosome IX contigs | |
| chromosome X reads | |
| chromosome X contigs | |
| chromosome XI reads | |
| chromosome XI contigs | |
| GSS/EST clusters |
The above GSSs clustered with ESTs. ESTs listing Trypanosoma brucei as organism (i.e. this will include ESTs from various subspecies and strains) were retrieved from public sequence databases for this analysis (see here for more information). |
| EMBL |
Last updated on June 2003 and containing all T. brucei sequences submitted to public databases. This does also include the TIGR "sequencing in progress" BAC clones, and therefore allows searching of all the submitted TIGR data. |
| African trypanosome Uniprot data |
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| T. brucei telomere test reads |
Reads generated from the 427 and 927 pilot telomere sequencing project |
