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CDS: hem1

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General Information   Add to Gene Basket  View Gene Basket
Namehem1
Systematic NameSPAC2F3.09
Reserved Namehem1
Status role inferred from homology
Product 5-aminolevulinate synthase    
TypeCDS
Sequence DNA and Protein
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Location
Chromosome 1
Contig Location 3940263..3941939   (Unspliced length: 1677 bp)
Exons 3940263..3941939   (Spliced length: 1677 bp)
Region download and display (in Artemis) Genome Browser
Context Map:
Context Feature Map

SPAC2F3.05c  kap104  SPAC2F3.07c  sut1  >hem1<  SPAC2F3.18c  SPAC2F3.10  SPAC2F3.11  SPAC2F3.12c  SPAC2F3.13c  saf2  SPNCRNA.239  
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Curation
Term Other genes annotated to this term
orthologous to S. cerevisiae YDR232W(0 Others)
conserved in Eukaryotes(4113 Others)
conserved in Bacteria(830 Others)
conserved in Metazoa(3558 Others)
conserved in Vertebrates(3556 Others)
conserved in Fungi(4163 Others)
predominantly uniformly single copy (one to one)(2867 Others)
 
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Predicted Peptide Properties
Mass
60.9 kDa Amino acids 558
pH 9.2 Charge 24.5
Isoelectric point
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Signal PeptideNot found
Transmembrane Domains0 found
GPI AnchorNot found
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Gene Ontology Annotation
Term (browse Amigo) Qualifier Evidence Other genes annotated to this term
Biological Process
heme biosynthetic process  ISS (PMID:17072883) with UniProtKB:P09950 12 others
Cellular Component
mitochondrial matrix  ISS (PMID:17072883) with UniProtKB:P09950 143 others
mitochondrion  IDA (PMID:16823372) 722 others
Molecular Function
5-aminolevulinate synthase activity  ISS (PMID:17072883) with UniProtKB:P09950 none
pyridoxal phosphate binding  IEA (GO_REF:0000002) with InterPro:IPR010961 39 others
transaminase activity  ISS (PMID:17072883) with Pfam:PF00155 23 others
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Catalytic Activity
EC 2.3.1.37 : IUBMB
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Published Expression Profiles
Gene Expression Viewer Cell Cycle
Gene Expression Viewer Meiosis
Gene Expression Viewer Environmental Stress
Gene Expression Viewer Pheromone Response/Mating
TranscriptomeViewer      SPAC2F3.09 High-resolution view of transcripts in neighbourhood
Array Express                   SPAC2F3.09 Array Express Expression profiles
Cyclebase                          SPAC2F3.09 Cell Cycle Expression Datasets
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Literature
Search for hem1 in PubMed
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Protein Families and Domains
View Pfam domain structure for this gene product
View SCOP superfamily
DB Accs Description
PfamPF00155Aminotransferase class I and II (10 Others)
InterProIPR010961Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase
InterProIPR004839Aminotransferase, class I and II
InterProIPR001917Aminotransferase, class-II, pyridoxal-phosphate binding site
InterProIPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
PROSITEPS00599Aminotransferases class-II pyridoxal-phosphate attachment site.
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Database Cross-References
DB Accs Description
UniProtKBO140925-aminolevulinate synthase, mitochondrial precursor (EC 2.3.1.37) (5- aminolevulinic acid synthase) (Delta-aminolevulinate synthase) (Delta- ALA synthetase).
EMBLCU329670Schizosaccharomyces pombe chromosome I
BioGridSPAC2F3.09curated genetic and physical interactions
EnsemblSPAC2F3.09Ensembl Fungi
NCBI Entrez GeneSPAC2F3.09NCBI Entrez Gene
FYSSIONSPAC2F3.09FYSSION
NBRPSPAC2F3.09Fission yeast strain database, National BioResource Project (Japan)
PIRT38542PIR
YOGYSPAC2F3.09Retrieval of eukaryotic orthologs
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UniProtKB Annotation For This Protein
Catalytic Activity Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO(2).
CofactorPyridoxal phosphate (By similarity).
PathwayPorphyrin metabolism; protoporphyrin-IX biosynthesis; 5- aminolevulinate from glycine: step 1/1.
SimilarityBelongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
Subcellular LocationMitochondrion matrix (By similarity).
Keywords Acyltransferase  (52 others) ,   Complete proteome  (4977 others) ,   Heme biosynthesis  (7 others) ,   Mitochondrion  (328 others) ,   Pyridoxal phosphate  (39 others) ,   Transferase  (528 others) ,   Transit peptide  (165 others)
 
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