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CDS: DID4

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This resource is provided to enable rapid linking between S. pombe genes and the datasets of their potential S. cerevisiae homologs. This resource is not curated (except for updates which affect 'Status changes' i.e. orphan to characterized). For full curation please use SGD or CYGD . For Gene Ontology associations please use SGD

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General Information   Add to Gene Basket  View Gene Basket
Name DID4
Systematic NameYKL002W
Gene Synonyms  
Status experimentally characterised (or published)
Description conserved eukaryotic protein   (38 others)  
TypeCDS
Sequence DNA and Protein
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Location
Chromosome 11
Location 437415..438181   (Unspliced length: 767 bp)
Exons join(437415..437474 , 437543..438181)   (Spliced length: 699 bp)
Region download and display (in Artemis)
Context Map:
Context Feature Map

MRT4  LAC1  CAP1  SFT1  RPL14A  YKL005C  AUR1  MRP17  >DID4<  MET14  VPS1  PAP1  YKR003W  ECM9  YKR005C  
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Predicted Peptide Properties
Mass
26.2 kDa Amino acids 232
pH 5.0 Charge -4.5
Isoelectric point
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Signal PeptideNot found
Transmembrane Domains0 found
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Catalytic Activity
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Literature
Search for DID4 in PubMed
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Domain Information
View Pfam domain structure
DB Accs Description
PfamPF03357Snf7
InterProIPR005024Snf7
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Database Cross-References
DB Accs Description
UniProtKBP36108DOA4-independent degradation protein 4 (Vacuolar protein-sorting- associated protein 2) (Vacuolar protein-targeting protein 14).
EMBLZ28002S.cerevisiae chromosome XI reading frame ORF YKL002w
GermOnlineYKL002WGermOnline
PIRS37812PIR
SGDYKL002WSGD
SGDS000001485SGD
CYGDYKL002WCYGD
CYGDYKL002wCYGD
YPDYKL002WProteome, Inc
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UniProtKB Annotation For This Protein
Function Required for the sorting and concentration of proteins resulting in the entry of these proteins into the invaginating vesicles of the multivesicular body (MVB).
Interaction Q06410:ATG17; NbExp=1; IntAct=EBI-26574, EBI-30856; P47135:JSN1; NbExp=1; IntAct=EBI-26574, EBI-9422; P43563:MOB2; NbExp=1; IntAct=EBI-26574, EBI-11125; P06100:NOT2; NbExp=1; IntAct=EBI-26574, EBI-12153; Q02794:STD1; NbExp=1; IntAct=EBI-26574, EBI-18344;
Sequence Caution Sequence=CAA81834.1; Type=Erroneous gene model prediction;
SimilarityBelongs to the SNF7 family.
Subcellular LocationCytoplasm. Endosome membrane; Peripheral membrane protein.
SubunitA component of the endosomal sorting required for transport complex III (ESCRT-III), which consists of DID4, SNF7, VPS20 and VPS24.
Keywords Coiled coil  ,   Complete proteome  ,   Cytoplasm  ,   Endosome  ,   Membrane  ,   Protein transport  ,   Transport 
 
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